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Typical Factor Layer Naming Scheme

  • FICTURE - N factor LDA with Wµm hexagons: FICTURE results layer, where N is the number of factors, and W is the hexagon bin size.
  • cell: Xenium cell segmentation (Xenium Ranger): Cell segmentation-based results layer from Xenium Ranger. This usually applies to the datasets from 10X Xenium.
  • cell: Visium HD cell segmentation (Space Ranger): Cell segmentation-based results layer from Space Ranger. This usually applies to the datasets from 10X Visium HD.
  • sqW: Visium HD WxWµm square bins (Space Ranger): Square bin-based results layer from Space Ranger, where W is the bin size. This usually applies to the datasets from 10X Visium HD.