Concepts Overview¶
This section defines the core concepts used in CartoScope.
It covers key terms, naming conventions, and distinctions between related concepts used throughout the application.
Data & Catalog¶
Map Viewer¶
Gene and Gene Group¶
Background Layers¶
Factor and Factor Assets¶
- What are Factor Layer, Factor Set, Factor, and Factor ID/Index?
- What is Typical Factor Layer Naming Scheme?
- What are Factor Layer Modes?
- What is Spatial Factor Interaction?
- What are Marker Genes?
- What Is Factor Weight?
- What Is Probability (Factor Assignment Confidence)?
- What Is a Pseudobulk File?
- What Is Multi-Sample Analysis?