Concepts Overview¶
This section defines the core concepts used in CartoScope.
It covers key terms, naming conventions, and distinctions between related concepts used throughout the application.
Basics¶
- What is
catalog.yaml? - What is External Data?
- What are Layer Types?
- What is Subsampling Rate?
- What is Total Transcripts?
Gene and Gene Group¶
Background Layers¶
Factor and Factor Assets¶
- What are Factor, Factor Index, Factor ID, Factor Set, and Factor Layer?
- Factor Layer Naming
- What are Factor Layer Modes?