Play with Your Own Data

CartoScope allows you to load and explore custom spatial transcriptomics datasets directly from a public or private URL (such as AWS S3 or Zenodo) without needing to submit them to the public CartoStore catalog.

Interface

Click the "+URL" button in the top-right corner of the dataset catalog to load an external dataset.

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Related Pages

Concepts

• What is External Data?
• What is catalog.yaml?

Manual Pages

• Explore Ready-to-Use Data

How-to Guides

• How to Prepare Your Own Data for CartoScope?
• How to Host Data in AWS
• How to Host Data in Zenodo
• How to Load External Data

FAQs

• External Dataset Loading Issue